It's painfully obvious that God did not create everything. Where or when did God exist before creating the universe? Without a universe, there is no there or then to exist in. Do you know what exists nowhere? Nothing, because things that exist are somewhere. Even the notion of creating presupposes a universe where, perhaps among other things, it is possible to create something: cause and effect is being assumed before the universe is supposed to exist. Did I say 'before the universe'? How can there be a before the universe when time doesn't exist yet? The long and short of all this is that, whichever way you swing it, God could not possibly have created everything, because one cannot create unless there is already some metauniverse to do the creating in. Among the laws of this metauniverse, of course, are basic logical truths.
I don't think people appreciate what they are saying when suggesting that God could act contrary to logical laws. One simply cannot do anything in a way that defies logic, because an action which is logically absurd is not a type of action at all: it's a nothing. An action is a definite event that occurs with intent and consequences, but what intent or consequences would accompany a contradictory non-action? God can no more act contradictory than he can make a circle version of a square. The only way God can make 1 = 2 is if, like the rest of us, he just redefines '1' and '2' to mean the same thing.